Difference between revisions of "Computational Epidemiology Task"
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Revision as of 16:51, 26 March 2020
A Computational Epidemiology Task is an epidemiological task that is a computational task.
References
2020
 (Wikipedia, 2020) ⇒ https://en.wikipedia.org/wiki/computational_epidemiology Retrieved:2020326.
 Computational epidemiology is a multidisciplinary field that uses techniques from computer science, mathematics, geographic information science and public health to better understand issues central to epidemiology such as the spread of diseases or the effectiveness of a public health intervention.
2014
 (Beckman et al., 2014) ⇒ [[::Richard Beckman]], [[::Keith R. Bisset]], [[::Jiangzhuo Chen]], [[::Bryan Lewis]], [[::Madhav Marathe]], and [[::Paula Stretz]]. ([[::2014]]). “ISIS: A Networkedepidemiology based Pervasive Web App for Infectious Disease Pandemic Planning and Response.” In: [[::Proceedings of the 20th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining]] ([[::KDD2014]]) Journal. ISBN:9781450329569 doi:10.1145/2623330.2623375
 QUOTE: We describe ISIS, a highperformancecomputingbased application to support computational epidemiology of infectious diseases. ... Using ISIS, one can carry out detailed computational experiments as they pertain to planning and response in the event of a pandemic. ISIS is designed to support networked epidemiology  study of epidemic processes over social contact networks. ...
2009
 (McKinley et al., 2009) ⇒ [[::Trevelyan McKinley]], [[::Alex R Cook]], and [[::Robert Deardon]]. ([[::2009]]). “Inference in Epidemic Models Without Likelihoods.” In: The International Journal of Biostatistics, 5(1).
 QUOTE: ... Likelihoodbased inference for epidemic models can be challenging, in part due to difficulties in evaluating the likelihood. The problem is particularly acute in models of largescale outbreaks, and unobserved or partially observed data further complicates this process. Here we investigate the performance of Markov Chain Monte Carlo and Sequential Monte Carlo algorithms for parameter inference, where the routines are based on approximate likelihoods generated from model simulations. ...