2009 SemanticAnnotationOfPapers

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Subject Headings: SAPIENT Annotation Tool, Semantic Text Annotation Tool, Semantically Annotated Corpus, Chemistry, Scientific Literature.


Cited By





  • E. Briscoe, J. Carroll and R. Watson 2006. The Second Release of the RASP System. Proceedings of the COLING/ACL 2006 Interactive Presentation Sessions,
  • P. Corbett, P. Batchelor and S. Teufel. (2007). Annotation of Chemical Named Entities. Proceedings of BioNLP.
  • Nikiforos Karamanis, Ruth Seal, Ian Lewin, Peter Mc- Quilton, Andreas Vlachos, Caroline Gasperin, Rachel Drysdale and Ted Briscoe. (2008). Natural Language Processing in aid of FlyBase curators. BMC Bioinformatics, 9:193.
  • Maria Liakata and Larisa N. Soldatova. (2008). Guidelines for the annotation of General Scientific Concepts JISC Project Report, http://ie-repository.jisc.ac.uk/.
  • Jimmy Lin 2009. Is Searching Full Text More Effective Than Searching Abstracts? BMC Bioinformatics, 10:46.
  • Ben Medlock and Ted Briscoe. (2007). Weakly supervised learning for hedge classification in scientific literature. 45th Annual Meeting of the Association for Computational Linguistics, 23-30 Jun 2007, Prague, Czech Republic.
  • P. Ogren. (2006). Knowtator: a Protégé plug-in for annotated corpus construction. Proceedings of the 2006 Conference of the North American Chapter of the Association For Computational Linguistics on Human Language Technology: Companion Volume: Demonstrations, New York Press, New York, June 04 - 09, 2006.
  • Lawrence Owusu. (2008). XML-Aware Sentence Splitter. MPhil thesis, Cambridge, UK.
  • CJ Rupp, Ann Copestake, Simone Teufel and Ben Waldron. (2006). Flexible Interfaces in the Application of Language Technology to an eScience Corpus. Proceedings of the UK e-Science Programme All Hands Meeting 2006 (AHM2006), Nottingham, UK Hagit Shatkay, Fengxia Pan, Andrey Rzhetsky and W.
  • John Wilbur. (2008). Multi-dimensional classification of biomedical text: Toward automated, practical provision of high-utility text to diverse users. Bioinformatics, 24(18):2086–2093.
  • Larisa N. Soldatova and Maria Liakata. (2007). An ontology methodology and CISP - the proposed Core Information about Scientific Papers. JISC Project Report, http://ie-repository.jisc.ac.uk/137/.
  • L. Soldatova, C. Batchelor, M. Liakata, H. Fielding, S. Lewis and R. King 2007. ART: An ontology based tool for the translation of papers into Semantic Web format. Proceedings of the SIG/ISMB07 ontology workshop., p.33–36.
  • Larisa N. Soldatova and Ross D. King. (2006). An Ontology of Scientific Experiments. Journal of the Royal Society Interface, 3:795–803.
  • S. Teufel and M. Moens. (2002). Summarizing Scientific Articles – Experiments with Relevance and Rhetorical Status. Computational Linguistics, 28(4). (preprint)
  • W. Wilbur, A. Rzhetsky and H. Shatkay. (2006). New Directions in Biomedical Text Annotations: Deifinitions, Guidelines and Corpus Construction. BMC Bioinformatics, 7:356.


 AuthorvolumeDate ValuetitletypejournaltitleUrldoinoteyear
2009 SemanticAnnotationOfPapersMaria Liakata
Q. Claire
Larisa Soldatova
Semantic Annotation of Papers: Interface & enrichment tool (SAPIENT)Proceedings of BioNLP Workshophttp://www.aber.ac.uk/en/media/sapientBio2009Final.pdf2009